UWinChem

Showing posts with label Bulent Mutus. Show all posts
Showing posts with label Bulent Mutus. Show all posts

Thursday, October 26, 2017

Biochemist to study how proteins contribute to neurodegenerative diseases

Biochemist to study how proteins contribute to neurodegenerative diseases


UWindsor biochemistry graduate student Cody Caba and professor Bulent Mutus display the crystal structure of protein disulfide isomerase. Mutus received an NSERC Discovery Grant to examine cell proteins and structures and how they contribute to diseases.

Bulent Mutus is a micro mechanic.

But instead of fixing cars with wrenches and grease, the biochemist rolls up his sleeves and chops up and rebuilds proteins using microscopes and Petri dishes.

“If this enzyme were a car we would know where the engine is, but now we are looking at turning that engine off so the pathology will go away,” the UWindsor professor said.

Dr. Mutus recently received a $100,000 Discovery Grant over five years from the Natural Sciences and Engineering Research Council of Canada (NSERC) to examine cell proteins and structures and how they contribute to diseases like cystic fibrosis and Alzheimer’s.

The human body is made up of about 10 trillion cells that intricately interact with one another to ensure the body functions properly. When cell-to-cell and internal cell signaling is disturbed, the body cannot function properly, and acute diseases and physiological or neurological disorders occur.

“It’s similar to a teeter-totter, wherein a normal situation everything is balanced,” Mutus explained.

Every cell contains strings of amino acid molecules that fold onto themselves, forming structures called proteins.


The crystal structure of protein disulfide isomerase is pictured in this computer visualization. 

“If there’s something that messes up the balance within the cell, then the proteins don’t fold properly, and you get something called unfolded protein response,” he said.

Diseases reactive to the unfolded protein response include Alzheimer’s, Parkinson’s and Huntington’s — as well as many others.

Proteins are encoded from DNA instructions and form in ways that allow them to combine with other substrates to perform work. When proteins do work, they are called enzymes and help the body to function properly.

Mutus’ NSERC research focuses on a sequence of amino acids containing sulfur, called cysteine amino acids, and the role they play in the regulation of enzymes. In the sequence, called the CXXC motif, two amino acids represented by the letter C for cysteine, are separated by any other two of the 23 amino acids, which are represented by X. These cysteine amino acids have a sulfur group that often binds to itself to create a stronger bond or fold within the protein structure.

Mutus said the sequence affects structure which in turn affects the function, and so improper sequences or structures can cause harmful pathologies in the body.

“Structure is related to function, and so if you build a building and you don’t have any doors it’s not going to be very functional,” the researcher said. “The same goes with a protein, and if a sequence works well in one particular protein, then it’s copied and repeatedly used somewhere else.”

By studying this CXXC protein sequence and its function in various cellular pathways, researchers can develop therapies to treat diseases caused by improper function.

Mutus’ lab has created probes that will bind to CXXC enzymes within the cells which can be followed to see their functions in internal cellular pathways.

He said an example of this is found in patients with cystic fibrosis. Within these patients, an enzyme called S-Nitrosoglutathione Reductase (GSNOR) is unable to form at appropriate levels in the lungs and can’t function in ion transport.

“If that ion transport protein can’t mature and enter into the cell membrane where it belongs, then fluid essentially starts to accumulate in the lungs and leads to infections,” Mutus said. “So if an enzyme contains this CXXC motif, and we think we can tweak onto something that’s a very small run of four or five amino acids, where we can play with one of the amino acids and really regulate the enzyme, like turning a car engine on and off to control negative pathologies in the body.”

Mutus’ research will eventually have implications in drug design as a means of controlling these important enzymes involved in pathologies and diseases that may affect all of us.

See the full story at the UWindsor Daily News

Friday, March 24, 2017

Students claim prizes at chemistry conference

Students claim prizes at chemistry conference



Professor Stephen Loeb congratulates prize-winning chemistry students Mitchell DiPasquale and Jacqueline Gemus.

Two UWindsor students received honours at the Southern Ontario Undergraduate Chemistry Conference, March 18 at York University.

Jacqueline Gemus, a student in professor Rob Schurko’s research group, won first prize in physical chemistry.

Dr. Schurko says Gemus’ main area of interest is the mechanochemical synthesis of porous framework materials known as zeolitic imidazolate frameworks (ZIFs) and the use of solid-state nuclear magnetic resonance to monitor the formation of these amazing framework materials.

“Jacqueline has made a wide array of new materials, and this work will be the first that describes ZIFs with mixed linker ligands which are simply made by vigorous grinding — a great example of ‘green chemistry,’ which uses no solvents and produces high yields of the final materials,” says Schurko.

Mitchell DiPasquale, a student from the laboratory of Bulent Mutus, head of chemistry and biochemistry, claimed second place in bio/medicinal chemistry.

Dr. Mutus calls DiPasquale an amazing undergraduate student who has excelled in protein chemistry research and has single-handedly explored the role of a repeating set of amino acids in the enzyme that produces sulfide in the human body.

“His research has, for the first time, shown that this amino acid motif plays a role in the regulation of sulfide production, as well as being responsible for a totally new previously undiscovered activity for this enzyme,” he says.

The University of Windsor was represented at the colloquium by a contingent of 14 undergraduate students from the Department of Chemistry and Biochemistry. A total of 127 presentations by students represented every university in southern Ontario, plus Laurentian and Nipissing.

See the original story at:

Monday, March 20, 2017

Undergrad researchers attend SOUSCC

Undergrad researchers attend SOUSCC

This Year’s Southern Ontario Undergraduate Chemistry Conference (SOUSCC) was held at York University on Sat March 18. There was a total of 127 presentations (Analytical, 21; Bio/Med, 28; Computational, 12; Inorg/Materials, 22; Organic, 32; Phys, 12) from all the universities in Southern Ontario plus Laurentian U and Nipissing U.  



The brilliant undergraduate researchers that represented our Department were:

BRENT ST. ONGE
JOHNNY LUO
JESSE ROPAT
MITCHELL DIPASQUALE
ALEXA DICECCO
ROSE FAYOUMI
ADVAIT DESAI
GREG YOUSIF
MOHAMED HARB
AUSTIN PEACH
JACQUELINE GEMUS
NADIA STEPHANIUK
NATAN VEINBERG
AUSTIN LINDQUIST
MILOSZ BRZOZOWSKI

Faculty attendees: Loeb, Green and Mutus

Two of our students received prizes:

JACQUELINE GEMUS (Schurko Group)- 1st Prize Physical Chemisty
MITCHELL DIPASQUALE (Mutus Group)- 2nd Prize in Bio/Medicinal Chemistry

Congratulations to all!

Submitted by Bulent Mutus, Department Head

Tuesday, April 26, 2016

Congratulations to Moira Parker and the Mutus Lab!

Congratulations to Moira Parker!

Moira Parker, a Grade 12 student at the Bruce Peninsula District School in Lions Head, ON, won the Natural Sciences Senior Award and a Silver medal at the17th annual Bluewater Regional Science and Technology Fair, on April 2, 2016 in Owen Sound, ON.  Moira’s project, Phosphate Removal in Wastewater using Natural Materials: Chitosan, Red Sand and Calcium Carbonate, was supported with chemicals, equipment and research advice from the MutusLab and the Department of Chemistry & Biochemistry.

For more information on Dr. Mutus' research, click here to visit his web site.



Tuesday, September 1, 2015

UWindsor making strides in protecting waterways from toxic algae blooms

UWindsor making strides in protecting waterways from toxic algae blooms

UWindsor researcher Bulent Mutus has designed and built a filter that can remove potentially harmful phosphates from contaminated water. Phosphates are a naturally occurring mineral, but increased levels in waterways, will substantially reduce water quality.


Phosphates are found in sewage and used in detergents and commercial fertilizers, so runoff from these practices and industries, will throw off the chemical balance of streams, rivers and the lakes. An abundance of phosphates create a nutrient rich environment that can encourage massive growth of some plants and algae.

Mutus’ research project, Large Scale Total Phosphate Filtration System, received almost $160,000 from Environment Canada, Lake Simcoe Georgian Bay Clean-Up Fund (LSGBCUF), for a two-year project to build and test a large scale version of the filtration unit at the Holland Canal in the Holland Marsh, near Barrie Ontario.

“Our filtration technology is a simple and cost effective alternative to current methods,” says Dr. Mutus, biochemistry professor. “It uses inexpensive, environmentally safe methods to remove phosphorus from point sources such as municipal and agricultural wastewater.”

To read more, click here for the Daily News page

Friday, July 25, 2014

Safety and SOPs

As part of its commitment to laboratory safety, the Department has recently launched several initiatives of which all faculty, staff and students need to be aware.


First, the Department has constituted a Departmental Safety Committee. The mandates of this Committee include reporting on safety to the Departmental Chair and council, reviewing safety-related incidents and complaints and recommending actions in response, pro-actively devising safety policies, and performing laboratory inspections. The Chair of this Committee and Departmental Safety Officer is Dr. Michael Boffa. The Committee's members are Nedhal Al-Nidawy (staff); Stephanie Kosnik (graduate student), Dr. Stephen Loeb (chemistry faculty) and Dr. Bulent Mutus (biochemistry faculty).

Inquiries regarding safety can be addressed to Dr. Boffa or to any of the committee members.


The second initiative is a Laboratory Safety Orientation Checklist that must be filled out by all existing faculty, staff, graduate students, and undergraduate students performing research. These checklists are intended to be a standardized platform to direct and document safety training for all Department members engaged in laboratory research.

Over the next few months, a departmental safety web page will be developed.

Please click here to visit the current incarnation of this page.

Monday, March 3, 2014

Chemist discovers shellfish material that may help prevent algal blooms

Chemist discovers shellfish material may help prevent algal blooms 

















Harmful algae blooms like the massive one that afflicted Lake Erie in 2011 are a serious threat to our waterways, but a chemistry researcher and his industrial partners are testing a new method of filtering agricultural wastewater with the help of an unexpected material: ground up shrimp and lobster shells.

Chitosan is a material made by treating crushed shellfish with sodium hydroxide, and professor Bulent Mutus is discovering that various forms are effective in lab tests at removing micronutrients, phosphates and metals like copper, zinc, and iron from greenhouse wastewater.

“There’s an inexpensive and plentiful supply of these materials, and we’ve been able to prove in concept that this can work,” said Dr. Mutus. “Now we’re just trying to scale it up in to an actual working filter that we can test in the field.”

Algal blooms are the result of an excess of nutrients, including nitrates and phosphates from household products and fertilizer used in agricultural and recreational settings, running off land into streams and rivers that drain in to warmer lakes. A large bloom could remove the water of oxygen fish and other aquatic wildlife need to survive.

To read more of this story, click here to see the full article on the Daily News.

Tuesday, October 15, 2013

Applications of nanoparticles topic of public lecture

UWindsor biochemistry professor Bulent Mutus will discuss the applications of nanoparticles— submicroscopic collections of atoms—in a free public lecture on Wednesday, October 16, at Canada South Science City.
Nanoparticles are roughly the size of molecules and too small to be seen in optical microscopes. They have properties that can differ significantly from the bulk material and that open new possibilities in analysis and therapeutic treatment.
Dr. Mutus will show how he and his research group use the properties of nanoparticles in a variety of applications, including:
  • detecting sulfur-containing compounds in the atmosphere and in our bodies;
  • identifying the location of sulfur-containing moieties in proteins that are susceptible to alteration in their structure and function by the gasotransmitters nitric oxide and hydrogen sulfide; and
  • making wound-healing bandages.
An award-winning Senior Research Chair and the head of the Department of Chemistry and Biochemistry, Mutus is the founding director of the University of Windsor’s Health Research Group and has published widely in his area of chemistry for health sciences.
Wednesday’s lecture, which begins at 7:30 p.m., is part of the Science Cafés series, discussions of important science research for the general public. The series is sponsored by the Faculty of Science at the University of Windsor.
Canada South Science City is located at 930 Marion Avenue.
Click here to see this story on the Daily News.